STRINGSTRING
IL1823 protein (Idiomarina loihiensis) - STRING interaction network
"IL1823" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1823Hypothetical protein (143 aa)    
Predicted Functional Partners:
rnd
Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides (390 aa)
 
        0.930
IL1825
Hypothetical protein (86 aa)
 
        0.900
IL1824
Membrane-bound lytic murein transglycosylase (345 aa)
              0.854
fadD
Acyl-CoA synthetase (556 aa)
              0.749
IL1205
Hypothetical protein (175 aa)
   
          0.652
recF
Recombinational DNA repair ATPase; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (354 aa)
   
        0.588
IL2099
Hypothetical protein (188 aa)
   
          0.585
mazG
Pyrophosphatase MazG (257 aa)
   
        0.541
IL1828
Alpha/beta hydrolase (289 aa)
              0.536
slp
Starvation-inducible outer membrane lipoprotein (192 aa)
              0.523
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (14%) [HD]