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IL1824 protein (Idiomarina loihiensis) - STRING interaction network
"IL1824" - Membrane-bound lytic murein transglycosylase in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1824Membrane-bound lytic murein transglycosylase (345 aa)    
Predicted Functional Partners:
IL1825
Hypothetical protein (86 aa)
              0.909
IL1823
Hypothetical protein (143 aa)
              0.854
dacA
D-alanyl-D-alanine carboxypeptidase (385 aa)
 
   
  0.802
rnd
Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides (390 aa)
              0.792
fadD
Acyl-CoA synthetase (556 aa)
              0.792
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides (330 aa)
   
 
    0.748
IL1828
Alpha/beta hydrolase (289 aa)
              0.565
slp
Starvation-inducible outer membrane lipoprotein (192 aa)
              0.551
IL1830
Hypothetical protein (99 aa)
              0.534
mrdA
Cell division protein FtsI (631 aa)
   
 
  0.474
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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