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IL1828 protein (Idiomarina loihiensis) - STRING interaction network
"IL1828" - Alpha/beta hydrolase in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1828Alpha/beta hydrolase (289 aa)    
Predicted Functional Partners:
slp
Starvation-inducible outer membrane lipoprotein (192 aa)
              0.843
acoA
Oxoisovalerate dehydrogenase subunits alpha/beta (728 aa)
 
 
    0.813
IL1830
Hypothetical protein (99 aa)
              0.806
fadD
Acyl-CoA synthetase (556 aa)
 
   
  0.737
IL0091
Long-chain acyl-CoA synthetase (449 aa)
   
  0.669
IL1831
Hypothetical protein (227 aa)
              0.640
dinG
ATP-dependent DNA helicase (650 aa)
              0.626
rnd
Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides (390 aa)
   
        0.619
IL1963
acyl-CoA dehydrogenase (594 aa)
   
  0.616
IL1665
acyl-CoA dehydrogenase (817 aa)
   
  0.616
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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