STRINGSTRING
IL1853 protein (Idiomarina loihiensis) - STRING interaction network
"IL1853" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1853Hypothetical protein (269 aa)    
Predicted Functional Partners:
IL1852
Hypothetical protein (251 aa)
 
   
  0.974
IL1856
Biopolymer transport protein (133 aa)
              0.634
IL1855
TonB-like periplasmic protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (203 aa)
              0.634
IL1854
Hypothetical protein (432 aa)
              0.634
IL1859
TonB system biopolymer transport component (280 aa)
              0.614
IL1858
TonB system biopolymer transport component (455 aa)
              0.614
IL1857
TonB system biopolymer transport component (174 aa)
              0.614
IL1851
Chemotaxis protein CheY (125 aa)
              0.481
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (177 aa)
              0.467
dnaX
DNA polymerase III, gamma/tau subunits (681 aa)
              0.427
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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