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IL1861 protein (Idiomarina loihiensis) - STRING interaction network
"IL1861" - Histone deacetylase/AcuC/AphA family protein in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1861Histone deacetylase/AcuC/AphA family protein (311 aa)    
Predicted Functional Partners:
IL1862
Hypothetical protein (91 aa)
              0.859
priC
Primosomal replication protein C (176 aa)
              0.859
hepA
ATP-dependent helicase HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair (886 aa)
     
  0.810
IL2310
Hypothetical protein (331 aa)
     
    0.736
mutS
Mismatch repair ATPase; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (843 aa)
   
      0.645
smc
Chromosome segregation ATPase, sms; Required for chromosome condensation and partitioning (1152 aa)
   
  0.644
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity (637 aa)
     
  0.634
IL1613
Superfamily I DNA/RNA helicase (910 aa)
     
    0.619
sIR2
NAD-dependent deacetylase (258 aa)
   
  0.615
serA
D-3-phosphoglycerate dehydrogenase (408 aa)
     
    0.609
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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