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IL1926 protein (Idiomarina loihiensis) - STRING interaction network
"IL1926" - Zn-dependent dipeptidase in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1926Zn-dependent dipeptidase (406 aa)    
Predicted Functional Partners:
IL1069
Glutamine amidotransferase related enzyme (219 aa)
          0.923
guaB
IMP dehydrogenase (489 aa)
   
 
    0.756
IL0401
Sugar phosphate isomerase (325 aa)
     
 
    0.563
IL2328
Dipeptidyl aminopeptidase (769 aa)
 
        0.536
IL1927
Hypothetical protein (85 aa)
              0.513
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (103 aa)
              0.490
IL2398
Phosphodiesterase-nucleotide pyrophosphatase-like protein (402 aa)
 
          0.428
rplC
Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (212 aa)
              0.424
rplD
Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (201 aa)
              0.401
rplW
Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (100 aa)
              0.401
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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