STRINGSTRING
cheX protein (Idiomarina loihiensis) - STRING interaction network
"cheX" - Chemotaxis protein CheX in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheXChemotaxis protein CheX (156 aa)    
Predicted Functional Partners:
IL1851
Chemotaxis protein CheY (125 aa)
       
  0.881
cheY
Chemotaxis protein CheY (123 aa)
       
  0.881
IL1931
Hypothetical protein (168 aa)
              0.859
IL1930
Zn-dependent aminopeptidase (776 aa)
              0.859
IL1715
Chemotaxis protein CheY (264 aa)
       
    0.803
IL1929
Zn2+ uptake transcriptional regulator (146 aa)
              0.801
IL1265
Hypothetical protein (251 aa)
   
          0.763
IL2315
Hypothetical protein (116 aa)
   
          0.759
IL0494
Hypothetical protein (568 aa)
   
          0.726
IL1711
Hypothetical protein (252 aa)
   
          0.717
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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