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IL1934 protein (Idiomarina loihiensis) - STRING interaction network
"IL1934" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1934Hypothetical protein (319 aa)    
Predicted Functional Partners:
IL1936
DNA-directed RNA polymerase specialized sigma subunit (175 aa)
 
          0.895
IL1935
Hypothetical protein (171 aa)
              0.828
IL0715
Hypothetical protein (146 aa)
   
          0.778
IL0479
Hypothetical protein (124 aa)
   
          0.772
IL1269
Zn-ribbon protein (109 aa)
   
          0.768
IL0859
SmpA /OmlA family lipoprotein (128 aa)
   
          0.760
IL2345
Hypothetical protein (167 aa)
   
          0.758
IL2320
HD superfamily hydrolase (390 aa)
   
          0.750
IL2278
Hypothetical protein (106 aa)
   
          0.749
IL1538
2OG-Fe(II) oxygenase (231 aa)
   
          0.719
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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