STRINGSTRING
exeB protein (Idiomarina loihiensis) - STRING interaction network
"exeB" - General secretion pathway protein B in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exeBGeneral secretion pathway protein B (236 aa)    
Predicted Functional Partners:
exeA
General secretion pathway ATPase (472 aa)
 
     
  0.887
pulN
Type II secretory pathway, component PulN (248 aa)
   
          0.769
syd
Syd; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function (183 aa)
   
          0.753
IL2268
Hypothetical protein (229 aa)
   
          0.738
IL1072
Glycosyltransferase (637 aa)
   
          0.737
IL1474
Hypothetical protein (71 aa)
   
          0.727
IL1519
Hypothetical protein (209 aa)
   
          0.725
IL2021
Type II secretory pathway, pseudopilin PulG-like (130 aa)
   
          0.699
IL1711
Hypothetical protein (252 aa)
   
          0.698
gadB
Glutamate decarboxylase (549 aa)
   
          0.691
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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