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pilT protein (Idiomarina loihiensis) - STRING interaction network
"pilT" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilTHypothetical protein (344 aa)    
Predicted Functional Partners:
IL0451
Type II secretory pathway, PulF-like (392 aa)
 
   
  0.963
pulO
Type II pili prepilin peptidase PilD/XcpA; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (286 aa)
 
   
  0.958
hofQ
Type II secretory pathway, component PulJ (427 aa)
 
   
  0.938
mshG
Type II secretory pathway (412 aa)
 
   
  0.923
IL2024
Type II secretory pathway, component PulF (408 aa)
 
   
  0.921
phoD
Phosphodiesterase/alkaline phosphatase D family enzyme (346 aa)
              0.859
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (274 aa)
              0.772
IL1974
TIM-barrel fold family protein (240 aa)
              0.772
IL1976
Hypothetical protein (175 aa)
              0.768
IL1977
Hypothetical protein (140 aa)
              0.733
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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