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IL1989 protein (Idiomarina loihiensis) - STRING interaction network
"IL1989" - Deoxyribodipyrimidine photolyase in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1989Deoxyribodipyrimidine photolyase (518 aa)    
Predicted Functional Partners:
blc
Outer membrane lipoprotein (178 aa)
              0.840
csgA
Cell-cell signaling protein CsgA (240 aa)
 
          0.794
cry
Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity) (449 aa)
 
     
  0.707
IL0525
Hypothetical protein (757 aa)
   
          0.634
IL1988
Glycosyltransferase (258 aa)
              0.627
kdtA
3-deoxy-D-manno-octulosonic-acid transferase (661 aa)
              0.627
IL2413
Hypothetical protein (47 aa)
 
          0.602
IL1550
Flavoprotein oxygenase domain-containing protein (218 aa)
 
          0.575
IL1381
Hypothetical protein (168 aa)
 
          0.560
IL2050
Hypothetical protein (83 aa)
 
          0.549
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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