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blc protein (Idiomarina loihiensis) - STRING interaction network
"blc" - Outer membrane lipoprotein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blcOuter membrane lipoprotein (178 aa)    
Predicted Functional Partners:
IL1765
Sugar nucleotide epimerase (296 aa)
        0.845
IL1989
Deoxyribodipyrimidine photolyase (518 aa)
              0.840
IL1988
Glycosyltransferase (258 aa)
              0.611
kdtA
3-deoxy-D-manno-octulosonic-acid transferase (661 aa)
              0.611
IL1389
Hypothetical protein (311 aa)
 
        0.583
IL1384
Hypothetical protein (240 aa)
 
        0.546
cry
Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity) (449 aa)
 
        0.531
IL1385
NAD/FAD-binding protein (424 aa)
 
        0.511
IL1388
Deoxyribodipyrimidine photolyase (468 aa)
 
        0.409
IL0881
Electron transfer flavoprotein-ubiquinone oxidoreductase (549 aa)
 
        0.405
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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