Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
IL1988 | IL1989 | IL1988 | IL1989 | Predicted glycosyltransferase. | Protein related to deoxyribodipyrimidine photolyase. | 0.556 |
IL1988 | blc | IL1988 | IL1990 | Predicted glycosyltransferase. | Outer membrane lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. | 0.523 |
IL1988 | kdtA | IL1988 | IL1987 | Predicted glycosyltransferase. | 3-deoxy-D-manno-octulosonic-acid transferase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.839 |
IL1989 | IL1988 | IL1989 | IL1988 | Protein related to deoxyribodipyrimidine photolyase. | Predicted glycosyltransferase. | 0.556 |
IL1989 | blc | IL1989 | IL1990 | Protein related to deoxyribodipyrimidine photolyase. | Outer membrane lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. | 0.774 |
IL1989 | kdtA | IL1989 | IL1987 | Protein related to deoxyribodipyrimidine photolyase. | 3-deoxy-D-manno-octulosonic-acid transferase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.546 |
blc | IL1988 | IL1990 | IL1988 | Outer membrane lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. | Predicted glycosyltransferase. | 0.523 |
blc | IL1989 | IL1990 | IL1989 | Outer membrane lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. | Protein related to deoxyribodipyrimidine photolyase. | 0.774 |
blc | kdtA | IL1990 | IL1987 | Outer membrane lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. | 3-deoxy-D-manno-octulosonic-acid transferase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.523 |
kdtA | IL1988 | IL1987 | IL1988 | 3-deoxy-D-manno-octulosonic-acid transferase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | Predicted glycosyltransferase. | 0.839 |
kdtA | IL1989 | IL1987 | IL1989 | 3-deoxy-D-manno-octulosonic-acid transferase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | Protein related to deoxyribodipyrimidine photolyase. | 0.546 |
kdtA | blc | IL1987 | IL1990 | 3-deoxy-D-manno-octulosonic-acid transferase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | Outer membrane lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. | 0.523 |