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IL1995 protein (Idiomarina loihiensis) - STRING interaction network
"IL1995" - ATPase in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1995ATPase (373 aa)    
Predicted Functional Partners:
sdhB
Succinate dehydrogenase iron-sulfur subunit (237 aa)
 
        0.840
sdhA
Succinate dehydrogenase flavoprotein subunit (588 aa)
 
        0.742
sucA
2-oxoglutarate dehydrogenase E1 (935 aa)
 
        0.661
IL1994
Thioredoxin (283 aa)
              0.603
sdhD
Succinate dehydrogenase, hydrophobic anchor subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) (115 aa)
 
          0.599
sdhC
Succinate dehydrogenase/fumarate reductase cytochrome b subunit (124 aa)
 
        0.531
sucB
2-oxoglutarate dehydrogenase; The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) (520 aa)
        0.523
IL0252
Hypothetical protein (204 aa)
   
 
      0.498
IL1996
SNF family Na(+)-dependent transporter (472 aa)
   
        0.471
IL2307
NUDIX family pyrophosphohydrolase (265 aa)
     
        0.471
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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