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tmcA protein (Idiomarina loihiensis) - STRING interaction network
"tmcA" - P-loop ATPase fused to an acetyltransferase in Idiomarina loihiensis
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
tmcAP-loop ATPase fused to an acetyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) (612 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (525 aa)
     
        0.988
rpsA
Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (560 aa)
     
      0.987
sun
tRNA and rRNA cytosine-C5-methylase (442 aa)
   
      0.887
IL1996
SNF family Na(+)-dependent transporter (472 aa)
              0.859
ftsJ
23S rRNA methylase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit (208 aa)
     
      0.855
truB
tRNA pseudouridine 5S synthase; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (310 aa)
     
      0.826
truD
Hypothetical protein; Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs (350 aa)
   
   
  0.825
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1342 aa)
     
 
  0.814
rpsQ
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (87 aa)
     
      0.812
deaD
ATP-dependent RNA helicase (594 aa)
   
      0.811
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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