STRINGSTRING
IL2008 protein (Idiomarina loihiensis) - STRING interaction network
"IL2008" - Porin in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2008Porin (392 aa)    
Predicted Functional Partners:
IL2005
Na+/proline symporter (1157 aa)
 
          0.860
IL2006
Response regulator (210 aa)
 
        0.796
IL2291
O-methyltransferase (275 aa)
   
          0.727
acs
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (646 aa)
              0.720
IL2152
Hypothetical protein (1115 aa)
   
          0.720
IL0479
Hypothetical protein (124 aa)
   
          0.692
IL0582
OmpA family Oar-like outer membrane protein (1053 aa)
   
          0.682
IL2339
Hypothetical protein (990 aa)
   
          0.666
IL2594
Hypothetical protein (781 aa)
   
          0.663
IL0117
Hypothetical protein (940 aa)
   
          0.641
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (3%) [HD]