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xseA protein (Idiomarina loihiensis) - STRING interaction network
"xseA" - Exonuclease VII, large subunit in Idiomarina loihiensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
xseAExonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (436 aa)    
Predicted Functional Partners:
xseB
Exonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (78 aa)
         
    0.800
recJ
Hypothetical protein (570 aa)
   
   
  0.798
IL2137
Geranylgeranyl pyrophosphate synthase (295 aa)
 
   
  0.721
recN
DNA repair ATPase RecN; May be involved in recombinational repair of damaged DNA (554 aa)
   
   
  0.717
sodB
Superoxide dismutase, Fe dependent; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (193 aa)
       
  0.714
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (677 aa)
 
     
  0.636
phoA
Alkaline phosphatase (435 aa)
              0.636
ruvA
Holliday junction resolvasome, DNA-binding subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (205 aa)
 
   
  0.632
IL2014
O-acetylhomoserine sulfhydrylase (422 aa)
              0.611
IL2013
Homoserine acetyltransferase (302 aa)
              0.607
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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