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IL2050 protein (Idiomarina loihiensis) - STRING interaction network
"IL2050" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2050Hypothetical protein (83 aa)    
Predicted Functional Partners:
IL1550
Flavoprotein oxygenase domain-containing protein (218 aa)
 
          0.681
IL2413
Hypothetical protein (47 aa)
 
          0.645
cry
Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity) (449 aa)
 
          0.594
IL2049
Hypothetical protein (65 aa)
              0.568
IL1989
Deoxyribodipyrimidine photolyase (518 aa)
 
          0.549
IL2048
RelE/ParE family protein (99 aa)
              0.506
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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