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IL2053 protein (Idiomarina loihiensis) - STRING interaction network
"IL2053" - Redox protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2053Redox protein (132 aa)    
Predicted Functional Partners:
katE
Catalase-like protein; Has an organic peroxide-dependent peroxidase activity (326 aa)
   
        0.718
IL2051
Cytochrome B561 (174 aa)
              0.715
csgA
Cell-cell signaling protein CsgA (240 aa)
 
        0.691
IL1262
Hypothetical protein (281 aa)
   
          0.611
IL2054
DNA ligase (291 aa)
              0.562
chrR
Transcription negative regulator ChrR (225 aa)
   
          0.562
IL1989
Deoxyribodipyrimidine photolyase (518 aa)
 
          0.546
IL0121
Hypothetical protein (151 aa)
 
          0.518
IL0283
Hypothetical protein (71 aa)
   
          0.505
IL1023
Hypothetical protein (98 aa)
   
          0.431
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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