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IL2058 protein (Idiomarina loihiensis) - STRING interaction network
"IL2058" - ABC transporter ATPase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2058ABC transporter ATPase (232 aa)    
Predicted Functional Partners:
IL2057
Membrane-fusion protein (422 aa)
 
  0.988
IL2060
ABC transporter permease (397 aa)
 
          0.968
IL2059
ABC transporter ATPase/permease (432 aa)
 
          0.961
tolC
Outer membrane protein (461 aa)
   
  0.941
IL2305
HlyD family secretion protein (351 aa)
 
  0.889
IL2265
ABC transporter permease (425 aa)
   
  0.879
IL1294
Hypothetical protein (359 aa)
   
  0.874
IL0601
RND family efflux system membrane fusion protein (347 aa)
   
  0.874
IL0466
RND efflux system membrane fusion protein (355 aa)
   
  0.874
IL2061
Response regulator (441 aa)
 
          0.871
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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