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IL2060 protein (Idiomarina loihiensis) - STRING interaction network
"IL2060" - ABC transporter permease in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2060ABC transporter permease (397 aa)    
Predicted Functional Partners:
IL2059
ABC transporter ATPase/permease (432 aa)
 
          0.972
IL2058
ABC transporter ATPase (232 aa)
 
          0.968
IL2057
Membrane-fusion protein (422 aa)
 
          0.916
IL2061
Response regulator (441 aa)
 
          0.897
IL2062
Signal protein (370 aa)
 
          0.857
IL0921
Hypothetical protein (423 aa)
   
          0.416
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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