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IL2198 protein (Idiomarina loihiensis) - STRING interaction network
"IL2198" - Signal transduction histidine kinase in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2198Signal transduction histidine kinase (472 aa)    
Predicted Functional Partners:
IL2199
Metal-dependent hydrolase (258 aa)
              0.801
rpoD
DNA-directed RNA polymerase sigma 70 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (609 aa)
              0.720
IL0909
Hypothetical protein (407 aa)
   
          0.658
IL2429
ABC transporter substrate-binding protein (428 aa)
   
          0.622
copD
Copper export protein (281 aa)
   
          0.617
IL2143
Hypothetical protein (215 aa)
   
          0.608
IL2635
Hypothetical protein (559 aa)
   
          0.601
IL0760
Hypothetical protein (264 aa)
   
          0.573
capC
Capsular polyglutamate biosynthesis membrane protein CapC (191 aa)
   
          0.521
IL1285
Hypothetical protein (581 aa)
   
          0.516
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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