STRINGSTRING
gshB protein (Idiomarina loihiensis) - STRING interaction network
"gshB" - Glutathione synthase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshBGlutathione synthase (314 aa)    
Predicted Functional Partners:
gshA
Gamma-glutamylcysteine synthetase (537 aa)
 
   
  0.993
ggt_2
Gamma-glutamyltranspeptidase (569 aa)
         
  0.975
ggt_1
Gamma-glutamyltranspeptidase (579 aa)
         
  0.975
IL1277
Aminopeptidase (863 aa)
     
 
  0.968
gor
Glutathione reductase (450 aa)
     
 
  0.962
IL2216
16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (243 aa)
 
   
  0.922
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (501 aa)
 
 
  0.915
gst
Glutathione S-transferase (212 aa)
 
   
    0.913
pepB
Aminopeptidase; Probably plays an important role in intracellular peptide degradation (432 aa)
   
 
  0.903
IL1034
Leucyl aminopeptidase (514 aa)
   
 
    0.901
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (4%) [HD]