STRINGSTRING
erpA protein (Idiomarina loihiensis) - STRING interaction network
"erpA" - HesB/IscA family protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erpAHesB/IscA family protein; Required for insertion of 4Fe-4S clusters for at least IspG (116 aa)    
Predicted Functional Partners:
sufA
Fe-S cluster assembly scaffold protein (118 aa)
 
   
  0.826
IL2241
Hypothetical protein (248 aa)
              0.780
sufC
Cysteine desulfurase (252 aa)
   
 
  0.776
IL1365
(Fe-S)-binding protein (86 aa)
 
 
  0.769
fdx
Ferredoxin (106 aa)
   
 
  0.738
csdA
Selenocysteine lyase/Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (405 aa)
 
 
  0.738
IL2040
Cysteine sulfinate desulfinase (385 aa)
 
   
  0.714
IL0820
Glycine cleavage system protein T; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication (297 aa)
 
 
  0.714
nfuA
DNA uptake protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins (192 aa)
   
 
  0.706
IL0154
Cysteine desulfurase (478 aa)
   
 
  0.689
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (10%) [HD]