STRINGSTRING
hemL protein (Idiomarina loihiensis) - STRING interaction network
"hemL" - Glutamate-1-semialdehyde aminotransferase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemLGlutamate-1-semialdehyde aminotransferase (427 aa)    
Predicted Functional Partners:
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) (423 aa)
 
  0.999
hemB
Delta-aminolevulinic acid dehydratase (335 aa)
 
 
  0.999
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (313 aa)
 
   
  0.988
hemE
Uroporphyrinogen-III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (358 aa)
 
   
  0.972
gltB
Glutamate synthase subunit alpha (1488 aa)
   
   
  0.908
pyrB
Aspartate carbamoyltransferase (337 aa)
   
   
  0.892
hemD
Uroporphyrinogen-III synthase (251 aa)
   
 
  0.867
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (364 aa)
   
   
  0.767
IL2243
Hypothetical protein (143 aa)
              0.744
eriC
Chloride channel protein EriC (564 aa)
              0.744
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (8%) [HD]