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pepB protein (Idiomarina loihiensis) - STRING interaction network
"pepB" - Leucyl aminopeptidase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepBLeucyl aminopeptidase; Probably plays an important role in intracellular peptide degradation (432 aa)    
Predicted Functional Partners:
ggt_2
annotation not available (569 aa)
     
 
  0.904
ggt_1
annotation not available (579 aa)
     
 
  0.904
gshB
annotation not available (314 aa)
   
 
    0.903
gshA
annotation not available (537 aa)
     
 
    0.900
IL1034
annotation not available (514 aa)
   
   
 
0.858
pepA
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (501 aa)
   
 
 
0.858
hrpB
annotation not available (820 aa)
   
        0.855
mrcB
Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) (755 aa)
   
        0.848
pepN_1
annotation not available (863 aa)
     
 
  0.820
metB
annotation not available (390 aa)
     
 
    0.804
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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