STRINGSTRING
pepB protein (Idiomarina loihiensis) - STRING interaction network
"pepB" - Aminopeptidase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepBAminopeptidase; Probably plays an important role in intracellular peptide degradation (432 aa)    
Predicted Functional Partners:
ggt_2
Gamma-glutamyltranspeptidase (569 aa)
     
 
  0.955
ggt_1
Gamma-glutamyltranspeptidase (579 aa)
     
 
  0.955
gshB
Glutathione synthase (314 aa)
   
 
  0.903
gshA
Gamma-glutamylcysteine synthetase (537 aa)
     
 
    0.900
IL1277
Aminopeptidase (863 aa)
     
 
  0.887
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (501 aa)
   
 
0.884
hrpB
Helicase, ATP-dependent (820 aa)
   
        0.861
mrcB
Peptidoglycan synthetase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) (755 aa)
              0.859
IL1034
Leucyl aminopeptidase (514 aa)
   
   
 
0.858
glyA
Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (418 aa)
   
 
  0.819
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (6%) [HD]