STRINGSTRING
IL2296 protein (Idiomarina loihiensis) - STRING interaction network
"IL2296" - Mn2+/Fe2+ transporter in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2296Mn2+/Fe2+ transporter (407 aa)    
Predicted Functional Partners:
IL1479
Allophanate hydrolase subunit 2 (317 aa)
 
   
  0.688
IL1480
Allophanate hydrolase subunit 1 (237 aa)
 
   
  0.686
IL1481
LamB/YcsF family protein (258 aa)
 
   
  0.660
hemE
Uroporphyrinogen-III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (358 aa)
           
  0.643
ccmH
Cytochrome c-type biogenesis protein CcmH (153 aa)
       
      0.607
IL2298
Histone deacetylase/AcuC/AphA family protein (305 aa)
   
        0.599
IL2297
4-hydroxybutyrate CoA-transferase (613 aa)
              0.595
IL1025
Extracellular metal-dependent peptidase (800 aa)
   
          0.557
IL0720
2-keto-4-pentenoate hydratase (341 aa)
       
      0.554
IL0695
Zinc-dependent carboxypeptidase domain-containing protein (872 aa)
   
          0.514
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (12%) [HD]