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IL2340 protein (Idiomarina loihiensis) - STRING interaction network
"IL2340" - Signal protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2340Signal protein (398 aa)    
Predicted Functional Partners:
IL2341
Hypothetical protein (147 aa)
              0.859
IL2456
Signal protein (690 aa)
 
          0.777
IL0935
Signal protein (763 aa)
   
          0.776
IL1784
Disrupted signaling protein (443 aa)
 
          0.775
IL1539
Signaling protein (529 aa)
   
          0.775
IL2545
Signaling protein (930 aa)
   
          0.773
IL2168
Signaling protein (562 aa)
   
          0.771
IL2267
Signal protein (737 aa)
   
          0.764
IL0500
Signal protein (244 aa)
 
          0.729
IL2342
AhpC/TSA family peroxiredoxin (209 aa)
            0.623
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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