STRINGSTRING
IL2358 protein (Idiomarina loihiensis) - STRING interaction network
"IL2358" - Hypothetical protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2358Hypothetical protein (709 aa)    
Predicted Functional Partners:
IL2357
Hypothetical protein (85 aa)
 
          0.970
pnuC
Nicotinamide mononucleotide transporter (208 aa)
 
          0.956
IL2115
Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (202 aa)
 
  0.918
IL1855
TonB-like periplasmic protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (203 aa)
 
  0.884
IL1858
TonB system biopolymer transport component (455 aa)
 
 
  0.848
licA
LPS biosynthesis choline kinase (247 aa)
              0.835
IL2118
TonB system biopolymer transport component (459 aa)
 
 
  0.833
IL1857
TonB system biopolymer transport component (174 aa)
 
 
  0.805
IL2117
TonB system biopolymer transport component (176 aa)
 
 
  0.803
IL2354
Major facilitator superfamily permease (441 aa)
              0.792
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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