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IL2385 protein (Idiomarina loihiensis) - STRING interaction network
"IL2385" - Photoactive yellow protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2385Photoactive yellow protein (125 aa)    
Predicted Functional Partners:
IL2386
4-coumarate--CoA ligase (422 aa)
 
          0.917
IL2384
TetR family transcriptional regulator (196 aa)
              0.613
IL0118
Calcineurin-like phosphoesterase (653 aa)
   
          0.557
IL2488
Hypothetical protein (870 aa)
   
          0.544
IL2101
Amidohydrolase (523 aa)
   
          0.543
ompA
Outer membrane protein and related peptidoglycan-associated (lipo)proteins (208 aa)
           
  0.517
hemE
Uroporphyrinogen-III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (358 aa)
           
  0.512
IL2059
ABC transporter ATPase/permease (432 aa)
   
          0.509
IL0688
Periplasmic substrate-binding protein (280 aa)
   
          0.465
IL0540
Multidrug ABC transporter ATPase and permease (598 aa)
   
          0.430
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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