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IL2396 protein (Idiomarina loihiensis) - STRING interaction network
"IL2396" - Na+/dicarboxylate symporter in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2396Na+/dicarboxylate symporter (454 aa)    
Predicted Functional Partners:
phnA
Hypothetical protein (112 aa)
              0.665
IL2398
Phosphodiesterase-nucleotide pyrophosphatase-like protein (402 aa)
 
        0.664
IL2395
Amino acid transporter (406 aa)
         
  0.652
IL2394
Glutathione synthase (315 aa)
              0.632
fumB
Fumarase B (507 aa)
   
   
  0.571
trkG
K+ transport system, membrane component (393 aa)
         
  0.420
IL0919
K+ transport system membrane component; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA (495 aa)
         
  0.420
IL0201
K+ uptake system protein (456 aa)
         
  0.420
IL0200
K+ uptake system protein (220 aa)
         
  0.405
trkA
K+ transport system, NAD-binding component (458 aa)
         
  0.405
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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