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IL2403 protein (Idiomarina loihiensis) - STRING interaction network
"IL2403" - HlyD family secretion protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2403HlyD family secretion protein (351 aa)    
Predicted Functional Partners:
IL2404
Multidrug ABC transporter permease/ATPase (909 aa)
 
   
  0.986
IL2405
Multidrug ABC transporter permease (371 aa)
 
        0.980
IL2402
Hypothetical protein (383 aa)
              0.575
capC
Capsular polyglutamate biosynthesis membrane protein CapC (191 aa)
              0.551
capB
NAD-dependent epimerase/dehydratase (401 aa)
              0.551
IL2259
Multidrug ABC transporter ATPase (309 aa)
   
        0.444
IL0312
Multidrug ABC transporter ATPase (241 aa)
   
        0.444
tolC
Outer membrane protein (461 aa)
     
      0.436
IL1634
Outer membrane efflux protein (415 aa)
     
      0.436
czcC
Co/Zn/Cd efflux system protein (415 aa)
     
      0.436
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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