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STRINGSTRING
IL2404 protein (Idiomarina loihiensis) - STRING interaction network
"IL2404" - annotation not available in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2404annotation not available (909 aa)    
Predicted Functional Partners:
IL2403
annotation not available (351 aa)
 
 
  0.977
IL2405
annotation not available (371 aa)
 
 
0.932
gsk
annotation not available (336 aa)
   
   
  0.567
IL2402
annotation not available (383 aa)
              0.555
capB
annotation not available (401 aa)
              0.538
capC
annotation not available (191 aa)
              0.534
gcvP_1_2
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (962 aa)
         
  0.477
ftsX
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division (329 aa)
           
  0.459
arcC/arsR
ArsC/ArsR fusion protein; Transcriptional repressor of ars operon; Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family (246 aa)
   
        0.455
IL2259
annotation not available (309 aa)
   
 
0.453
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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