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IL2404 protein (Idiomarina loihiensis) - STRING interaction network
"IL2404" - Multidrug ABC transporter permease/ATPase in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2404Multidrug ABC transporter permease/ATPase (909 aa)    
Predicted Functional Partners:
IL2403
HlyD family secretion protein (351 aa)
 
   
  0.986
IL2405
Multidrug ABC transporter permease (371 aa)
 
0.977
ctaA
Hypothetical protein (329 aa)
       
    0.870
IL1315
GlcD-like FAD/FMN dehydrogenase/GlpC-like Fe-S oxidoreductase domain-containing protein (1009 aa)
         
  0.840
IL2258
Multidrug ABC transporter permease (259 aa)
   
  0.803
IL0311
Multidrug ABC transporter permease (245 aa)
   
  0.801
IL2259
Multidrug ABC transporter ATPase (309 aa)
   
0.792
IL0312
Multidrug ABC transporter ATPase (241 aa)
   
0.792
queF
7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (274 aa)
   
        0.780
ccmC
Cytochrome C biogenesis ABC transporter permease (245 aa)
       
  0.774
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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