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ppiC protein (Idiomarina loihiensis) - STRING interaction network
"ppiC" - Parvulin-like peptidyl-prolyl isomerase in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppiCParvulin-like peptidyl-prolyl isomerase (92 aa)    
Predicted Functional Partners:
IL1001
Peptidyl-prolyl isomerase (622 aa)
   
     
  0.833
IL2410
Hypothetical protein (144 aa)
              0.767
fkpA
FKBP-type peptidylprolyl isomerase (246 aa)
     
 
  0.659
IL2409
Hypothetical protein (152 aa)
              0.588
ppiB
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (165 aa)
     
 
  0.582
bamA
Surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (833 aa)
   
 
  0.556
IL0714
HIT family hydrolase (122 aa)
   
 
  0.555
IL0686
HIT family hydrolase (134 aa)
   
 
  0.555
guaB
IMP dehydrogenase (489 aa)
     
 
  0.554
apaH
Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5’,5’’’-P1,P4-tetraphosphate to yield ADP (272 aa)
   
  0.524
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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