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IL2418 protein (Idiomarina loihiensis) - STRING interaction network
"IL2418" - Amino acid transporter LysE in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2418Amino acid transporter LysE (212 aa)    
Predicted Functional Partners:
IL2419
Cro/CI family transcriptional regulator (191 aa)
              0.641
IL2417
Transcriptional regulator (367 aa)
              0.556
IL2420
EXOIII family exonuclease (192 aa)
              0.527
IL2491
LysR family transcriptional regulator (285 aa)
         
  0.413
IL0627
LysR family transcriptional regulator (290 aa)
         
  0.413
nhaR
LysR family transcriptional regulator (288 aa)
         
  0.413
rarD
Membrane protein RarD (311 aa)
 
        0.403
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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