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IL2422 protein (Idiomarina loihiensis) - STRING interaction network
"IL2422" - Alpha/beta hydrolase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2422Alpha/beta hydrolase (298 aa)    
Predicted Functional Partners:
IL2423
DNA-directed RNA polymerase specialized sigma factor (357 aa)
 
          0.892
IL1592
TonB dependent receptor for iron chelates (974 aa)
   
          0.667
IL1596
Hypothetical protein (893 aa)
   
          0.659
IL2177
Hypothetical protein (785 aa)
   
          0.648
IL0117
Hypothetical protein (940 aa)
   
          0.615
IL2154
Hypothetical protein (735 aa)
   
          0.557
fecR
Iron-dicitrate sensor, membrane component (319 aa)
   
          0.553
IL1595
Hypothetical protein (485 aa)
   
          0.540
IL2421
Hypothetical protein (287 aa)
              0.536
IL2337
Aminopeptidase (562 aa)
   
          0.527
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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