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pldB protein (Idiomarina loihiensis) - STRING interaction network
"pldB" - Lysophospholipase in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pldBLysophospholipase (334 aa)    
Predicted Functional Partners:
ugpQ
Glycerophosphoryl diester phosphodiesterase (242 aa)
 
 
  0.926
glpQ
Glycerophosphodiester phosphodiesterase (339 aa)
 
 
  0.925
IL2489
Outer membrane phospholipase A (343 aa)
   
 
  0.909
cpxR
Response regulator (226 aa)
     
 
  0.876
cpxA
Signal transduction histidine kinase (453 aa)
   
        0.863
IL1305
Universal stress protein UspE (308 aa)
   
        0.644
glnG
Nitrogen regulation protein (468 aa)
              0.633
glnL
Nitrogen-specific sensor histidine kinase (373 aa)
              0.632
glnA
Glutamine synthetase (469 aa)
   
        0.590
tesB
acyl-CoA thioesterase (286 aa)
   
          0.459
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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