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cpxR protein (Idiomarina loihiensis) - STRING interaction network
"cpxR" - Response regulator in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpxRResponse regulator (226 aa)    
Predicted Functional Partners:
cpxA
Signal transduction histidine kinase (453 aa)
 
  0.999
envZ
Osmolarity sensor protein (436 aa)
 
  0.894
pldB
Lysophospholipase (334 aa)
     
 
  0.876
arcA
Response regulator (219 aa)
   
 
 
0.843
kdpD
K+ sensor histidine kinase (343 aa)
  0.830
IL2583
Signal transduction histidine kinase (474 aa)
  0.825
glnL
Nitrogen-specific sensor histidine kinase (373 aa)
       
  0.824
glnG
Nitrogen regulation protein (468 aa)
   
 
0.822
phoR
Phosphate regulon sensor histidine kinase (431 aa)
  0.815
hnr
Response regulator of sigma subunit, serine phosphatase (CheY-RsbU) (329 aa)
   
 
  0.811
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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