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acrR protein (Idiomarina loihiensis) - STRING interaction network
"acrR" - AcrAB operon repressor in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrRAcrAB operon repressor (204 aa)    
Predicted Functional Partners:
acrA
Acriflavin resistance protein A (384 aa)
   
   
  0.761
tolC
Outer membrane protein (461 aa)
   
   
  0.691
IL2439
Hemolysin III-like protein (222 aa)
   
   
  0.586
IL2440
Hypothetical protein (93 aa)
              0.580
IL2304
RND family efflux transporter (1032 aa)
   
   
  0.565
acrB
Acriflavin resistance protein B (1033 aa)
   
   
  0.565
IL0602
RND family efflux transporter (1035 aa)
   
   
  0.565
IL2404
Multidrug ABC transporter permease/ATPase (909 aa)
   
   
  0.530
IL1683
RND family efflux transporter (1058 aa)
   
   
  0.505
IL1295
RND family efflux transporter (1041 aa)
   
   
  0.505
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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