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IL2447 protein (Idiomarina loihiensis) - STRING interaction network
"IL2447" - Ribonuclease BN in Idiomarina loihiensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2447Ribonuclease BN (284 aa)    
Predicted Functional Partners:
dtd
D-Tyr-tRNAtyr deacylase; D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo (145 aa)
   
        0.790
rph
RNase PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (237 aa)
       
  0.759
rnt
Ribonuclease T; Trims short 3’ overhangs of a variety of RNA species, leaving a one or two nucleotide 3’ overhang. Responsible for the end-turnover of tRNA- specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis (215 aa)
       
    0.753
IL2449
Acetyltransferase domain-containing protein (300 aa)
   
      0.725
rne
RNase E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs (980 aa)
       
    0.688
csgA
Cell-cell signaling protein CsgA (240 aa)
              0.672
cafA
RNase G (489 aa)
       
    0.668
dnaQ
DNA polymerase III subunit epsilon (235 aa)
       
    0.576
IL1420
DNA polymerase III subunit epsilon (248 aa)
       
    0.576
IL1176
3’-5’ exonuclease (215 aa)
       
    0.576
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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