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hutU protein (Idiomarina loihiensis) - STRING interaction network
"hutU" - Urocanate hydratase in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase (558 aa)    
Predicted Functional Partners:
hutH
Histidine ammonia-lyase (511 aa)
 
  0.999
hutI
Imidazolonepropionase (408 aa)
 
 
  0.999
IL0134
Histidine ammonia-lyase (515 aa)
 
  0.997
farR
succinyl-CoA synthetase operon transcriptional regulator (233 aa)
 
   
  0.979
IL1717
Amidohydrolase (1026 aa)
   
 
  0.910
IL2390
Xaa-Pro dipeptidase (424 aa)
   
 
  0.905
IL1716
Amidohydrolase (433 aa)
   
 
  0.880
IL0605
Hypothetical protein (1058 aa)
   
 
  0.880
IL0310
Metal-dependent hydrolase (430 aa)
   
 
  0.880
IL0297
Metal-dependent hydrolase (453 aa)
   
 
  0.880
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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