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IL2454 protein (Idiomarina loihiensis) - STRING interaction network
"IL2454" - Arginase in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2454Arginase (349 aa)    
Predicted Functional Partners:
argD
Ornithine/acetylornithine aminotransferase (405 aa)
         
    0.965
rraA
Demethylmenaquinone methyltransferase; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome (161 aa)
              0.863
hutI
Imidazolonepropionase (408 aa)
 
   
  0.855
IL1717
Amidohydrolase (1026 aa)
 
   
    0.778
IL0479
Hypothetical protein (124 aa)
   
          0.739
IL1521
Hypothetical protein (365 aa)
   
          0.725
IL0859
SmpA /OmlA family lipoprotein (128 aa)
   
          0.721
IL2132
Hypothetical protein (110 aa)
   
          0.718
IL2113
Porin (323 aa)
   
          0.716
IL1401
Zn-ribbon protein (69 aa)
   
          0.716
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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