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IL2478 protein (Idiomarina loihiensis) - STRING interaction network
"IL2478" - AhpC/TSA family peroxiredoxin in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2478AhpC/TSA family peroxiredoxin (163 aa)    
Predicted Functional Partners:
trxA
Thioredoxin (108 aa)
   
  0.872
trxC
Thioredoxin related protein (142 aa)
   
  0.872
IL0212
Thioredoxin related protein (174 aa)
   
  0.864
dsbA
Disulfide isomerase (204 aa)
     
  0.862
IL2069
Thioredoxin related protein (112 aa)
     
  0.862
IL1464
Thioredoxin related protein (149 aa)
     
  0.862
dsbE
Disulfide isomerase (182 aa)
     
  0.862
rsmJ
SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA (263 aa)
              0.861
IL2479
Flavoprotein (393 aa)
              0.861
elaA
Acetyltransferase (150 aa)
              0.859
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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