STRINGSTRING
IL2479 protein (Idiomarina loihiensis) - STRING interaction network
"IL2479" - Flavoprotein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2479Flavoprotein (393 aa)    
Predicted Functional Partners:
rsmJ
SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA (263 aa)
              0.862
IL2478
AhpC/TSA family peroxiredoxin (163 aa)
              0.861
elaA
Acetyltransferase (150 aa)
              0.859
dam
DNA adenine methylase (290 aa)
              0.859
damX
Hypothetical protein (519 aa)
              0.621
aroB
3-dehydroquinate synthase (357 aa)
              0.524
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (177 aa)
              0.486
IL1743
RNA pseudouridylate synthase-family protein (286 aa)
     
      0.457
IL1309
RNA pseudouridylate synthase-family protein (191 aa)
     
      0.453
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (10%) [HD]