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rhaR protein (Idiomarina loihiensis) - STRING interaction network
rhaRS operon positive regulator in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaRrhaRS operon positive regulator (343 aa)    
Predicted Functional Partners:
thiE
Thiamine monophosphate synthase (504 aa)
       
    0.754
mnmC
Fused DadA-like amino acid oxidase domain/uncharacterized domain-containing protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 (606 aa)
   
 
      0.638
IL2483
Metal dependent amidohydrolase (503 aa)
              0.616
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine (359 aa)
       
      0.554
IL2422
Alpha/beta hydrolase (298 aa)
   
          0.515
IL2485
AraC family transcriptional regulator (270 aa)
              0.512
IL2491
LysR family transcriptional regulator (285 aa)
     
        0.503
IL0627
LysR family transcriptional regulator (290 aa)
     
        0.503
nhaR
LysR family transcriptional regulator (288 aa)
     
        0.503
IL1108
FlhB domain-containing protein (93 aa)
     
        0.501
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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