STRINGSTRING
IL2500 protein (Idiomarina loihiensis) - STRING interaction network
"IL2500" - Alpha/beta hydrolase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL2500Alpha/beta hydrolase (279 aa)    
Predicted Functional Partners:
IL2499
uracil-DNA glycosylase (196 aa)
              0.859
IL2501
ferredoxin-NADP reductase (260 aa)
              0.745
IL2498
Hypothetical protein (238 aa)
              0.653
IL2497
Hypothetical protein (225 aa)
              0.653
IL2503
Hypothetical protein (276 aa)
              0.538
IL2502
Hypothetical protein (355 aa)
              0.538
IL2073
Hypothetical protein (343 aa)
   
        0.406
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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