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xerC protein (Idiomarina loihiensis) - STRING interaction network
"xerC" - Site-specific recombinase XerC in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xerCSite-specific recombinase XerC (300 aa)    
Predicted Functional Partners:
IL2554
Hypothetical protein (231 aa)
   
        0.911
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (420 aa)
   
        0.910
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (275 aa)
   
        0.891
xerD
Site-specific recombinase (300 aa)
   
 
0.875
IL2552
DHH family phosphohydrolase (236 aa)
   
        0.874
IL2557
Hypothetical protein (48 aa)
              0.859
hemY
Hypothetical protein (387 aa)
   
        0.687
hemD
Uroporphyrinogen-III synthase (251 aa)
   
        0.680
hemX
Regulator of HemA biosynthesis (375 aa)
   
        0.680
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (313 aa)
   
        0.653
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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