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hemY protein (Idiomarina loihiensis) - STRING interaction network
"hemY" - Hypothetical protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemYHypothetical protein (387 aa)    
Predicted Functional Partners:
hemX
Regulator of HemA biosynthesis (375 aa)
 
        0.924
hemD
Uroporphyrinogen-III synthase (251 aa)
 
   
  0.921
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (313 aa)
   
   
  0.890
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (102 aa)
       
      0.780
hemF
Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (304 aa)
         
  0.762
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (364 aa)
         
  0.759
IL2554
Hypothetical protein (231 aa)
 
        0.755
IL1980
Hypothetical protein (383 aa)
     
 
    0.746
hemN
Coproporphyrinogen III oxidase (453 aa)
     
 
    0.746
lppC
Lipoprotein (627 aa)
   
        0.695
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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