STRINGSTRING
glpR protein (Idiomarina loihiensis) - STRING interaction network
"glpR" - Repressor of the glycerol-3-phosphate regulon in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpRRepressor of the glycerol-3-phosphate regulon (234 aa)    
Predicted Functional Partners:
IL1994
Thioredoxin (283 aa)
   
 
      0.844
IL2592
Hypothetical protein (433 aa)
 
          0.673
ptsN
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) (156 aa)
 
     
  0.663
plcC
Phospholipase C (679 aa)
 
          0.572
trxC
Thioredoxin related protein (142 aa)
 
 
      0.563
trxA
Thioredoxin (108 aa)
 
 
      0.527
ptsO
Phosphotransferase system, HPr-related protein NPr (91 aa)
 
     
  0.469
dsbA
Disulfide isomerase (204 aa)
     
      0.456
IL2069
Thioredoxin related protein (112 aa)
     
      0.456
IL1464
Thioredoxin related protein (149 aa)
     
      0.456
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (8%) [HD]