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tnsE protein (Idiomarina loihiensis) - STRING interaction network
"tnsE" - Transposon Tn7 transposition transposition regulatory protein TnsE in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnsETransposon Tn7 transposition transposition regulatory protein TnsE (436 aa)    
Predicted Functional Partners:
tnsC
Transposon Tn7 transposition protein TnsC (555 aa)
 
     
  0.959
tnsD
Transposon Tn7 transposition protein TnsD (502 aa)
 
     
  0.959
tnsB
Transposon Tn7 transposition protein TnsB (692 aa)
 
     
  0.955
tnsA
Transposon Tn7 transposition protein TnsA (275 aa)
 
     
  0.952
glmS
Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (610 aa)
         
  0.533
IL2608
Site-specific DNA-methyltransferase (445 aa)
              0.522
IL2607
Signaling protein (745 aa)
              0.522
IL2606
Hypothetical protein (388 aa)
              0.522
IL2605
Hypothetical protein (242 aa)
              0.518
comM
ATPase (515 aa)
           
  0.517
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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