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tnsA protein (Idiomarina loihiensis) - STRING interaction network
"tnsA" - Transposon Tn7 transposition protein TnsA in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnsATransposon Tn7 transposition protein TnsA (275 aa)    
Predicted Functional Partners:
tnsB
Transposon Tn7 transposition protein TnsB (692 aa)
 
     
  0.986
tnsC
Transposon Tn7 transposition protein TnsC (555 aa)
 
     
  0.986
tnsD
Transposon Tn7 transposition protein TnsD (502 aa)
 
     
  0.986
tnsE
Transposon Tn7 transposition transposition regulatory protein TnsE (436 aa)
 
     
  0.952
glmS
Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (610 aa)
         
  0.696
vsr
DNA mismatch endonuclease, patch repair protein (171 aa)
           
  0.517
sfsA
SfsA (234 aa)
           
  0.517
rmuC
DNA recombination protein RmuC (447 aa)
           
  0.517
rfaH
Transcription antiterminator RfaH (165 aa)
           
  0.517
mutH
DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair (224 aa)
           
  0.517
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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